Publikationen von Dr. Tobias Boskamp
Buchkapitel (2)
- P. Maaß, L. Hauberg-Lotte, T. Boskamp.
MALDI Imaging: Exploring the Molecular Landscape.
German Success Stories in Industrial Mathematics, H. Bock, K. Küfer, P. Maaß, A. Milde, V. Schulz (Hrsg.), Mathematics in Industry, S. 97-103, Springer Verlag, 2022. - P. Maaß, T. Boskamp, V. Dicken, R. Bischoff, H. Peters, H. Stark.
Bilddatenkompression mit Wavelet-Methoden.
Mathematik: Schlüsseltechnologie für die Zukunft, Verbundprojekte zwischen Universität und Industrie, F. Hoffmann, W. Jäger, B. Lohmann, H. Schunck (Hrsg.), S. 385-394, Springer Verlag, 1997.
Zeitschriftenartikel (12)
- C. Janßen, T. Boskamp, L. Hauberg-Lotte, J. Behrmann, S. Deininger, M. Kriegsmann, K. Kriegsmann, G. Steinbuß, H. Winter, T. Muley, R. Casadonte, J. Kriegsmann, P. Maaß.
Robust subtyping of non-small cell lung cancer whole sections through MALDI mass spectrometry imaging.
Proteomics - Clinical Applications, PRCA2208 , 2022. - T. Boskamp, R. Casadonte, L. Hauberg-Lotte, S. Deininger, J. Kriegsmann, B. Maass.
Cross-Normalization of MALDI Mass Spectrometry Imaging Data Improves Site-to-Site Reproducibility.
Analytical Chemistry, 93(30):10584-10592, 2021.online unter: https://doi.org/10.1021/acs.analchem.1c01792
- J. Le Clerc Arrastia, N. Heilenkötter, D. Otero Baguer, L. Hauberg-Lotte, T. Boskamp, S. Hetzer, N. Duschner , J. Schaller , P. Maaß.
Deeply Supervised UNet for Semantic Segmentation to Assist Dermatopathological Assessment of Basal Cell Carcinoma.
MDPI Journal of Imaging, 71 7(4), Meisenbach Verlag, Bamberg, 2021. - O. Klein, F. Fogt, S. Hollerbach, G. Nebrich, T. Boskamp, A. Wellmann.
Classification of Inflammatory Bowel Disease from Formalin‐Fixed, Paraffin‐Embedded Tissue Biopsies via Imaging Mass Spectrometry.
Proteomics - Clinical Applications, 190131 , Wiley, 2020. - F. Lieb, T. Boskamp, H. Stark.
Peak detection for MALDI mass spectrometry imaging data using sparse frame multipliers.
Journal of Proteomics, 103852 225, Elsevier, 2020. - T. Boskamp, D. Lachmund, R. Casadonte, L. Hauberg-Lotte, J. H. Kobarg, J. Kriegsmann, P. Maaß.
Using the chemical noise background in MALDI mass spectrometry imaging for mass alignment and calibration.
Analytical Chemistry, 92(1):1301-1308, 2020.DOI: 10.1021/acs.analchem.9b04473
online unter: https://doi.org/10.1021/acs.analchem.9b04473 - J. Behrmann, C. Etmann, T. Boskamp, R. Casadonte, J. Kriegsmann, P. Maaß.
Deep Learning for Tumor Classification in Imaging Mass Spectrometry.
Bioinformatics, 34(7):1215-1223, Oxford University Press, 2018. - J. Leuschner, M. Schmidt, P. Fernsel, D. Lachmund, T. Boskamp, P. Maaß.
Supervised Non-negative Matrix Factorization Methods for MALDI Imaging Applications.
Bioinformatics, bty909 , 2018. - Y. Cordero Hernandez, T. Boskamp, R. Casadonte, L. Hauberg-Lotte, J. Oetjen, D. Lachmund, A. Peter, D. Trede, K. Kriegsmann, M. Kriegsmann, J. Kriegsmann, P. Maaß.
Targeted Feature Extraction in MALDI Mass Spectrometry Imaging to Discriminate Proteomic Profiles of Breast and Ovarian Cancer.
Proteomics - Clinical Applications, 1700168 , Wiley, 2018. - T. Boskamp, D. Lachmund, J. Oetjen, Y. Hernandez-Cordero, D. Trede, P. Maaß, R. Casadonte, J. Kriegsmann, A. Warth, H. Dienemann, W. Weichert, M. Kriegsmann.
A new classification method for MALDI imaging mass spectrometry data acquired on formalin-fixed paraffin-embedded tissue samples.
BBA - Proteins and Proteomics, , 2016. - J. Oetjen, D. Lachmund, A. Palmer, F. Alexandrov, M. Becker, T. Boskamp, P. Maaß.
An approach to optimize sample preparation for MALDI imaging MS of FFPE sections using fractional factorial design of experiments.
Analytical and Bioanalytical Chemistry, 408(24):6729-40, 2016. - J. Ricke, P. Maaß, E. L. Hänninen, T. Liebig, H. Amthauer, C. Stroszczynski, W. Schauer, T. Boskamp, M. Wolf.
Wavelet Versus JPEG (Joint Photographic Expert Group) and Fractal Compression: Impact on the Detection of Low-Contrast Details in Computed Radiographs.
Investigative Radiology, 33(8):456-463, 1998.
Preprints (1)
- C. Etmann, M. Schmidt, J. Behrmann, T. Boskamp, L. Hauberg-Lotte, A. Peter, R. Casadonte, J. Kriegsmann, P. Maaß.
Deep Relevance Regularization: Interpretable and Robust Tumor Typing of Imaging Mass Spectrometry Data.
Zur Veröffentlichung eingereicht.online unter: https://arxiv.org/abs/1912.05459
Tagungsbeiträge (1)
- T. Boskamp, D. Lachmund, J. Oetjen, Y. Hernandez-Cordero, J. Behrmann, J. H. Kobarg, R. Casadonte, J. Kriegsmann, P. Maaß.
Visualizing MALDI TOF datasets of FFPE tissue samples for the purpose of quality assessment and comparison.
OurCon IV - 2016, 17.10.-21.10.2016, Ustron, Polen.
online unter: http://www.bioradint.eu/ourcon_public/papersview.php?showdetail=&paper_id=45