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Dr. Jan Hendrik Kobarg

Ehemaliger Mitarbeiter der WG Industrial Mathematics

Room: BITZ

Projects

  1. EU-UNLocX: Uncertainty principles versus localization properties, function systems for efficient coding schemes (01.09.2010 - 31.08.2013)

Theses (Selection)complete list

  1. Vergleich des Einflusses der räumlichen Glättungsmethoden Chambolle und bilaterales Filtern für MALDI-Daten anhand von Segmentierungskarten (Nicolas Jathe)
  2. Blind Source Separation für MALDI-Imaging (Jens Behrmann)
  3. Wavelet-Based Baseline Correction for MALDI TOF MS (Magdalena Metzger)

Patents

  1. P. Maaß, J. H. Kobarg, F. Alexandrov, P. Vandergheynst, M. Goldabaee.
    Verfahren zum rechnergestützten Verarbeiten von räumlich aufgelösten Hyperspektraldaten, insbesondere von Massenspektrometriedaten.
    German Patent and Trade Mark Office DE102013207402A1,
    Number of registration: 1020132074, Date of registration: 24.04.2013.
    Published in patent bulletin no.: on 30.10.2014.

Publications (Selection)complete list

  1. T. Boskamp, D. Lachmund, R. Casadonte, L. Hauberg-Lotte, J. H. Kobarg, J. Kriegsmann, P. Maaß.
    Using the chemical noise background in MALDI mass spectrometry imaging for mass alignment and calibration.
    Analytical Chemistry, 92(1):1301-1308, 2020.

    DOI: 10.1021/acs.analchem.9b04473
    online at: https://doi.org/10.1021/acs.analchem.9b04473

  2. S. Devaux, D. Cizkova, J. Quanico, J. Franck, S. Nataf, L. Pays, L. Hauberg-Lotte, P. Maaß, J. H. Kobarg, F. Kobeissy, C. Mériaux, M. Wisztorski, L. Slovinska, J. Blasko, V. Cigankova, I. Fournier, M. Salzet.
    Proteomic Analysis of the Spatio-temporal Based Molecular Kinetics of Acute Spinal Cord Injury Identifies a Time- and Segment-specific Window for Effectife Tissue Repair.
    Molecular & Cellular Proteomics, 15:2641-2670, 2016.

    DOI: 10.1074/mcp.M115.057794

  3. T. Boskamp, D. Lachmund, J. Oetjen, Y. Hernandez-Cordero, J. Behrmann, J. H. Kobarg, R. Casadonte, J. Kriegsmann, P. Maaß.
    Visualizing MALDI TOF datasets of FFPE tissue samples for the purpose of quality assessment and comparison.
    OurCon IV - 2016, 17.10.-21.10.2016, Ustron, Poland.

    online at: http://www.bioradint.eu/ourcon_public/papersview.php?showdetail=&paper_id=45

  4. J. Oetjen, K. Veselkov, J. Watrous, J. McKenzie, M. Becker, L. Hauberg-Lotte, J. H. Kobarg, A. K. Mróz, N. Strittmatter, F. Hoffmann, D. Trede, A. Palmer, S. Schiffler, K. Steinhorst, M. Aichler, R. Goldin, O. Guntinas-Lichius, F. von Eggeling, H. Thiele, K. Mädler, A. Walch, P. Maaß, P. C. Dorrestein, Z. Takats, F. Alexandrov.
    Benchmark datasets for 3D MALDI- and DESI-imaging mass spectrometry.
    GigaScience, 4, 2015.

    DOI: 10.1186/s13742-015-0059-4

  5. H. Thiele, S. Heldmann, D. Trede, J. Strehlow, S. Wirtz, W. Dreher, J. Berger, J. Oetjen, J. H. Kobarg, B. Fischer, P. Maaß.
    2D and 3D MALDI-Imaging: Conceptual Strategies for Visualization and Data Mining.
    BBA - Proteins and Proteomics, 1844(1):117-137, 2014.

    DOI: 10.1016/j.bbapap.2013.01.040