Publikationen von Dr. Janina Oetjen
Zeitschriftenartikel (17)
- A. Ardestani, S. Li, K. Annamalai, B. Lupse, S. Geravandi, A. Dobrowolski, S. Yu, S. Zhu, T. D. Baguley, M. Surakattula, J. Oetjen, L. Hauberg-Lotte, R. Herranz, S. Awal, D. Altenhofen, V. Nguyen-Tran, S. Joseph, P. G. Schultz, A. K. Chatterjee, N. Rogers, M. S. Tremblay, W. Shen, K. Maedler.
Neratinib protects pancreatic beta cells in diabetes.
Nature Communications, 10(5015), 2019.DOI: 10.1038/s41467-019-12880-5.
online unter: https://doi.org/10.1038/s41467-019-12880" target="doi">015 | https://doi.org/10.1038/s41467-019-12880 - Y. Cordero Hernandez, T. Boskamp, R. Casadonte, L. Hauberg-Lotte, J. Oetjen, D. Lachmund, A. Peter, D. Trede, K. Kriegsmann, M. Kriegsmann, J. Kriegsmann, P. Maaß.
Targeted Feature Extraction in MALDI Mass Spectrometry Imaging to Discriminate Proteomic Profiles of Breast and Ovarian Cancer.
Proteomics - Clinical Applications, 1700168 , Wiley, 2018. - J. Nüße, M. Waespy, U. Mirastschijski, J. Oetjen, N. Brandes, O. Rebello, F. Paroni, S. Kelm, F. Dietz.
Two new isoforms of the human hepatoma-derived growth factor interact with components of the cytoskeleton.
Biological Cemistry, 397(5), 417–436 S., 2016. - T. Boskamp, D. Lachmund, J. Oetjen, Y. Hernandez-Cordero, D. Trede, P. Maaß, R. Casadonte, J. Kriegsmann, A. Warth, H. Dienemann, W. Weichert, M. Kriegsmann.
A new classification method for MALDI imaging mass spectrometry data acquired on formalin-fixed paraffin-embedded tissue samples.
BBA - Proteins and Proteomics, , 2016. - J. Oetjen, D. Lachmund, A. Palmer, F. Alexandrov, M. Becker, T. Boskamp, P. Maaß.
An approach to optimize sample preparation for MALDI imaging MS of FFPE sections using fractional factorial design of experiments.
Analytical and Bioanalytical Chemistry, 408(24):6729-40, 2016. - F. Hoffmann, J. M. Lotz, J. Lotz, S. Heldmann, D. Trede, J. Oetjen, M. Becker, G. Ernst, P. Maaß, F. Alexandrov, O. Guntinas-Lichius, H. Thiele, F. von Eggeling.
Integration of 3D multimodal imaging data of a head and neck cancer and advanced feature recognition.
BBA - Proteins and Proteomics, , 2016. - J. Oetjen, K. Veselkov, J. Watrous, J. McKenzie, M. Becker, L. Hauberg-Lotte, J. H. Kobarg, A. K. Mróz, N. Strittmatter, F. Hoffmann, D. Trede, A. Palmer, S. Schiffler, K. Steinhorst, M. Aichler, R. Goldin, O. Guntinas-Lichius, F. von Eggeling, H. Thiele, K. Mädler, A. Walch, P. Maaß, P. C. Dorrestein, Z. Takats, F. Alexandrov.
Benchmark datasets for 3D MALDI- and DESI-imaging mass spectrometry.
GigaScience, 4, 2015. - C. Song, M. Mazzola, X. Cheng, J. Oetjen, F. Alexandrov, P. C. Dorrestein, J. Watrous, M. van der Voort, J. M. Raaijmakers.
Molecular and chemical dialogues in bacteria-protozoa interactions.
Scientific Reports, Article ID 12837 5, 2015.DOI: 10.1038/srep12837
- H. Thiele, S. Heldmann, D. Trede, J. Strehlow, S. Wirtz, W. Dreher, J. Berger, J. Oetjen, J. H. Kobarg, B. Fischer, P. Maaß.
2D and 3D MALDI-Imaging: Conceptual Strategies for Visualization and Data Mining.
BBA - Proteins and Proteomics, 1844(1):117-137, 2014. - O. Klein, K. Strohschein, G. Nebrich, J. Oetjen, D. Trede, H. Thiele, F. Alexandrov, P. Giavalisco, G. N. Duda, P. Roth von, S. Geissler, J. Klose, T. Winkler.
MALDI imaging mass spectrometry: Discrimination of pathophysiological regions in traumatized skeletal muscle by characteristic peptide signatures.
Proteomics, 14(20):2249-2260, 2014. - J. H. Kobarg, P. Maaß, J. Oetjen, O. Tropp, E. Hirsch, C. Sagiv, M. Goldabaee, P. Vandergheynst.
Numerical experiments with MALDI Imaging data.
Advances in Computational Mathematics, 40(3):667-682, 2014. - R. M. M. Abed, L. Polerecky, A. Al-Habsi, J. Oetjen, M. Strous, D. de Beer.
Rapid Recovery of Cyanobacterial Pigments in Desiccated Biological Soil Crusts following Addition of Water.
PLoS ONE, , 2014. - J. Oetjen, M. Aichler, D. Trede, J. Strehlow, J. Berger, S. Heldmann, M. Becker, M. Gottschalk, J. H. Kobarg, S. Wirtz, S. Schiffler, H. Thiele, A. Walch, P. Maaß, F. Alexandrov.
MRI-compatible pipeline for three-dimensional MALDI imaging mass spectrometry using PAXgene fixation .
Journal of Proteomics, 90:52-60, 2013. - D. Trede, S. Schiffler, M. Becker, S. Wirtz, K. Steinhorst, J. Strehlow, M. Aichler, J. H. Kobarg, J. Oetjen, A. Dyatlov, S. Heldmann, A. Walch, H. Thiele, P. Maaß, F. Alexandrov.
Exploring Three-Dimensional Matrix-Assisted Laser Desorption/Ionization Imaging Mass Spectrometry Data: Three-Dimensional Spatial Segmentation of Mouse Kidney.
Analytical Chemistry, 84(14):6079-6087, 2012.DOI: 10.1021/ac300673y
- D. Trede, J. H. Kobarg, J. Oetjen, H. Thiele, P. Maaß, F. Alexandrov.
On the Importance of Mathematical Methods for Analysis of MALDI-Imaging Mass Spectrometry Data.
Journal of Integrative Bioinformatics, 9(1), 189 S., 2012.DOI: 10.2390/biecoll-jib-2012-189
online unter: JIB open access - J. Oetjen, B. Reinhold-Hurek.
Characterization of the DraT/DraG System for Posttranslational Regulation of Nitrogenase in the Endophytic Betaproteobacterium Azoarcus sp. Strain BH72.
Journal of Bacteriology, 191(11):3726-3735, 2009.DOI: 10.1128/JB.01720-08
- J. Oetjen, S. Rexroth, B. Reinhold-Hurek.
Mass spectrometric characterization of the covalent modification of the nitrogenase Fe-protein in Azoarcus sp. BH72.
The FEBS Journal, 276(13):3618-3627, 2009.
Tagungsbeiträge (1)
- T. Boskamp, D. Lachmund, J. Oetjen, Y. Hernandez-Cordero, J. Behrmann, J. H. Kobarg, R. Casadonte, J. Kriegsmann, P. Maaß.
Visualizing MALDI TOF datasets of FFPE tissue samples for the purpose of quality assessment and comparison.
OurCon IV - 2016, 17.10.-21.10.2016, Ustron, Polen.
online unter: http://www.bioradint.eu/ourcon_public/papersview.php?showdetail=&paper_id=45