Publications of the year 2013

Articles (38)

1. F. Alexandrov.
   Imaging mass spectrometry reveals modified forms of histone H4 as new biomarkers of microvascular invasion in hepatocellular carcinomas.
   Hepatology, 58(3):983-94, 2013.

   DOI: 10.1002/hep.26433

2. F. Alexandrov.
   The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013.
   POLS Computational Biology, 9(11), e10003350 pp., 2013.

   DOI: 10.1371/journal.pcbi.1003350

3. F. Alexandrov, A. Bartels.
   Testing for presence of known and unknown molecules in imaging mass spectrometry.
   Bioinformatics, 29(18):2335-2342, 2013.

   DOI: 10.1093/bioinformatics/btt388

4. F. Alexandrov, M. Becker, A. C. Crecelius.
   Phenalenone-type phytoalexins mediate resistance of banana plants (Musa spp.) to the burrowing nematode Radopholus similis.
   Proceedings of the National Academy of Sciences of the United States of America , , 2013.

   DOI: 10.1073/pnas.1314168110

5. F. Alexandrov, P. E. . Bourne.
   Learning how to run a lab: interviews with Principal Investigators.
   POLS Computational Biology, 9(11), e1003349 pp., 2013.

   DOI: 10.1371/journal.pcbi.1003349

6. F. Alexandrov, P. Lasch.
   Segmentation of Confocal Raman Microspectroscopic Imaging Data Using Edge-Preserving Denoising and Clustering.
   Analytical Chemistry, 85(12):5676-83, 2013.

   DOI: 10.1021/ac303257d

7. T. Arens, K. Sandfort, S. Schmitt, A. Lechleiter.
   Analysing Ewald's method for the evaluation of Green's functions for periodic media.
   IMA Journal of Applied Mathematics, 78(3):405-431, 2013.

   DOI: 10.1093/imamat/hxr057
   online at: Link

8. A. Bartels, P. Dülk, D. Trede, F. Alexandrov, P. Maaß.
   Compressed sensing in imaging mass spectrometry.
   Inverse Problems, 29(12), 125015 (24pp), IOPscience, 2013.

   Selected as one of the highlights among all articles published in IOP "Inverse Problems" in 2013.

   DOI: 10.1088/0266-5611/29/12/125015

9. D. Biermann, H. Blum, I. Iovkov, N. Klein, A. Rademacher, F. Suttmeier.
   Stabilization techniques and a posteriori error estimates for the obstacle problem.
   Applied Mathematical Sciences, 7(127):6329-6346, 2013.
10. V. M. Calo, N. Collier, M. Gehre, B. Jin, H. Radwan, M. Santillana.
    Gradient-based estimation of Manning's friction coefficient from noisy data.
    Journal of Computational and Applied Mathematics, 238:1-13, 2013.

    DOI: 10.1016/j.cam.2012.08.004

11. A. Kemper, M. Wöbbekind, C. Büskens, M. Schollmeyer.
    LQR control for a Diesel engine's air system.
    PAMM, 13(1), 473–474 pp., WILEY-VCH, 2013.

    DOI: 10.1002/pamm.201310229

12. P. . Khazan , A. Barr, A. Luttmann, A. von Hehl, A. Schmidt, F. Vollertsen.
    Simulationsansatz zur Beurteilung der quasistatischen Festigkeit geschweißter Mischverbindungen.
    Schweißen und Schneiden, 65(8):500-503, DVS Media GmbH, 2013.
13. E. King.
    Smooth parseval frames for L²(ℝ) and generalizations to L²(ℝ^d) .
    International Journal of Wavelets, Multiresolution and Information Processing, 11(6), World Scientific, 2013.

    DOI: 10.1142/S0219691313500471

14. A. Kirsch, A. Lechleiter.
    The inside–outside duality for scattering problems by inhomogeneous media.
    Inverse Problems, 29(10), 104011, IOPscience, 2013.

    DOI: doi:10.1088/0266-5611/29/10/104011
    online at: Link

15. A. Lechleiter, K. Kazimierski, M. Karamehmedovic.
    Tikhonov regularization in L^p applied to inverse medium scattering.
    Inverse Problems, 29, 075003, IOPscience, 2013.

    DOI: doi:10.1088/0266-5611/29/7/075003
    online at: Link

16. A. Lechleiter, D. L. Nguyen.
    Factorization Method for Electromagnetic Inverse Scattering from Biperiodic Structures.
    SIAM Journal on Imaging Sciences, 6(2):1111-1139, SIAM, 2013.

    DOI: 10.1137/120903968
    online at: Link

17. A. Lechleiter, D. L. Nguyen.
    On Uniqueness in Electromagnetic Scattering from Biperiodic Structures .
    ESAIM: Mathematical Modelling and Numerical Analysis, 47:1167-1184, 2013.

    DOI: 10.1051/m2an/2012063
    online at: Link

18. A. Lechleiter, D. L. Nguyen.
    Volume Integral Equations for Scattering from Anisotropic Diffraction Gratings.
    Mathematical Methods in the Applied Sciences, 36(3), 262–274 pp., 2013.

    DOI: 10.1002/mma.2585
    online at: http://onlinelibrary.wiley.com/doi/10.1002/mma.2585/abstract

19. A. Lechleiter, T. Rienmüller.
    Factorization Method for the Inverse Stokes Problem.
    Inverse Problems and Imaging, 7(4):1271-1293, 2013.

    DOI: doi:10.3934/ipi.2013.7.1271
    online at: Link

20. T. Linke, C. Büskens, S. Meier.
    Lattice Boltzmann Constraints for Standard Optimization Problems.
    PAMM, 13(1), 337–338 pp., WILEY-VCH, 2013.

    DOI: 10.1002/pamm.201310164

21. D. Lorenz, S. Wenger, M. Magnor.
    Fast image-based modeling of astronomical nebulae.
    Computer Graphics Forum, 32(7), 2013.
22. H. S. Mahato, M. Böhm.
    Global existence and uniqueness for a system of semilinear multi-species diffusion-reaction equations.
    The Journal of Applied Analysis and Computation, 3(4):357-376, 2013.

    online at: http://jaac-online.com/index.php/jaac/article/view/173

23. H. S. Mahato, M. Böhm.
    Homogenization of a system of semilinear diffusion-reaction equations in an H^{1,p} setting.
    Electronic Journal of Differential Equations, 210:1-22, 2013.

    online at: http://ejde.math.txstate.edu/Volumes/2013/210/mahato.pdf

24. R. Mahnken , M. Wolff, C. Cheng.
    A Multi-Mechanism Model for Cutting Simulations Combining Visco-plastic Asymmetry and Phase Transformation.
    International Journal of Solids and Structures, 50(20):3045-3066, Elsevier, 2013.

    DOI: 10.1016/j.ijsolstr.2013.05.008
    online at: http://www.sciencedirect.com/science/article/pii/S0020768313002023

25. J. Montalvo Urquizo, Q. Liu, A. Schmidt.
    Simulation of quenching involved in induction hardening including mechanical effects.
    Computational Materials Science, 79:639-649, Elsevier, 2013.

    DOI: 10.1016/j.commatsci.2013.06.058

26. J. Montalvo Urquizo, M. Ungermann.
    Size Selection for Representative Volume Elements on Texturized Thin Metallic Sheets under Elastic Loads.
    PAMM, 2013 1:265-266, WILEY-VCH, 2013.

    DOI: DOI: 10.1002/pamm.201310128
    online at: http://onlinelibrary.wiley.com/doi/10.1002/pamm.201310128/abstract

27. J. Oetjen, M. Aichler, D. Trede, J. Strehlow, J. Berger, S. Heldmann, M. Becker, M. Gottschalk, J. H. Kobarg, S. Wirtz, S. Schiffler, H. Thiele, A. Walch, P. Maaß, F. Alexandrov.
    MRI-compatible pipeline for three-dimensional MALDI imaging mass spectrometry using PAXgene fixation .
    Journal of Proteomics, 90:52-60, 2013.

    DOI: 10.1016/j.jprot.2013.03.013

28. Q. M. Pham, D. Nho Hào, P. Maaß, M. Pidcock.
    Semismooth Newton and Quasi-Newton methods in weighted l¹-regularization.
    Journal of Inverse and Ill-posed Problems, 21(5):665-693, 2013.

    DOI: 10.1515/jip-2013-0031

29. I. Piotrowska-Kurczewski, J. Schlasche, D. Weimer, B. Scholz-Reiter, P. Maaß.
    Image Denoising and Quality inspection of Micro Components using Perona-Malik Diffusion.
    Procedia CIRP, 8:432-437, Elsevier, 2013.

    DOI: 10.1016/j.procir.2013.06.129

30. C. M. Rath, J. Y. Yang, F. Alexandrov, P. C. Dorrestein.
    Data-independent microbial metabolomics with ambient ionization mass spectrometry.
    Journal of Mass Spectrometry, 24(8):1167-1176, 2013.

    DOI: 10.1007/s13361-013-0608-y

31. M. Jahn, H. Brüning, A. Schmidt, F. Vollertsen.
    Energy dissipation in laser-based free form heading: a numerical approach.
    Production Engineering - Research and Development, , Springer Verlag, 2013.

    DOI: 10.1007/s11740-013-0509-8
    online at: http://link.springer.com/article/10.1007%2Fs11740-013-0509-8

32. M. Jahn, A. Luttmann, A. Schmidt.
    Finite element simulation for material accumulation and welding processes including a free melt surface.
    PAMM, 13(1), 235–236 pp., Wiley, 2013.

    DOI: 10.1002/pamm.201310113
    online at: http://onlinelibrary.wiley.com/doi/10.1002/pamm.201310113/abstract

33. H. Brüning, M. Jahn, A. Schmidt.
    Process Window For Forming Of Micro Preforms At Different Temperatures.
    Advanced Materials Research, 769:173-180, Trans Tech Publications, 2013.

    DOI: doi:10.4028/www.scientific.net/AMR.769.173
    online at: http://www.scientific.net/AMR.769.173

34. S. Steurer, C. Borkowski, S. Odinga, M. Buchholz, C. Koop, H. Huland, M. Becker, M. Witt, D. Trede, M. Omidi, O. Kraus, A. S. Bahar, A. S. Seddiqi, J. M. Singer, M. Kwiatkowski, M. Trusch, R. Simon, M. Wurlitzer, S. Minner, T. Schlomm, G. Sauter, H. Schlüter.
    MALDI mass spectrometric imaging based identification of clinically relevant signals in prostate cancer using large-scale tissue microarrays.
    Erscheint in International Journal of Cancer

    DOI: 10.1002/ijc.28080

35. J. Watrous, F. Alexandrov, P. C. Dorrestein.
    Interspecies interactions stimulate diversification of the Streptomyces coelicolor secreted metabolome.
    mBio, 4(4):e00459-13, 2013.

    DOI: 10.1128/mBio.00459-13

36. J. Watrous, F. Alexandrov, P. C. Dorrestein.
    Microbial metabolic exchange in 3D.
    ISME Journal, 7(4):770-780, 2013.

    DOI: 10.1038/ismej.2012.155

37. J. Watrous, P. Roach, B. S. Heath, F. Alexandrov, J. Laskin, P. C. Dorrestein.
    Metabolic Profiling Directly from the Petri Dish Using Nanospray Desorption Electrospray Ionization Imaging Mass Spectrometry.
    Analytical Chemistry, 85(21), 10385–10391, 2013.

    DOI: 10.1021/ac4023154

38. M. Wöbbekind, A. Kemper, C. Büskens, M. Schollmeyer.
    Nonlinear Parameter Identification for Ordinary Differential Equations.
    PAMM, 13(1), 457–458 pp., WILEY-VCH, 2013.

    DOI: 10.1002/pamm.201310221